Cherry Lim
Wellcome Early-Career Research Fellow
Cherry Lim is based at the University of Oxford and the Mahidol-Oxford Tropical Medicine Research Unit, Thailand. Cherry currently holds a Wellcome Early Career Award. The goal of Cherry's Wellcome-funded project is to develop a framework to inform Antimicrobial Stewardship (AMS) and Infection Prevention and Control (IPC) guidelines for settings with a high burden of antibiotic resistance. Cherry will be generating multi-species bacterial genomic data and linking them to clinical, microbial phenotype, treatment, and outcome data on hospital-acquired infections. She will also combine probabilistic bacterial transmission and causal models, and use passive surveillance data to quantify the expected impacts of implementing different guidelines.
Previously, Cherry worked as a postdoctoral researcher in Ben Cooper’s DRIaDD group based in Oxford. Her work used causal inference to help quantify the burden of antimicrobial-resistant infections. This involved applying a counterfactual framework to analyse the relationship between antibiotic-resistant infections and patient mortality using longitudinal data.
Other projects that Cherry was involved in included assessing the cost-effectiveness of an enhanced surveillance system in Timor-Leste, evaluating the impact of empirical antibiotic use on patient survival to inform antibiotic use policy (the Wellcome-funded ADILA project), and a collaborative project with Direk Limmathurotsakul on developing tools for an antimicrobial resistance surveillance system.
She completed a DPhil in 2022 on projects focusing on hospital-acquired drug-resistant bacterial infections and antimicrobial resistance surveillance systems in Southeast Asia. Here is her career story on the Wellcome’s Research Careers examples page.
Recent publications
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Epidemiology and excess mortality of antimicrobial resistance in bacteraemias among cancer patients: a cohort study using routinely collected health data from regional hospital trusts in Oxford and Oslo, 2008-2018.
Journal article
Danielsen AS. et al, (2025), BMJ Open, 15
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Cost-effectiveness of maintaining an active hospital microbiology laboratory service in Timor-Leste.
Journal article
Lim C. et al, (2025), Lancet Reg Health Southeast Asia, 36
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Situational analysis of antibiotic prescriptions in Kenyan neonatal units for antimicrobial stewardship: a retrospective longitudinal study.
Journal article
Aluvaala J. et al, (2025), EClinicalMedicine, 82
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Conference report of the 2024 Antimicrobial Resistance Meeting.
Journal article
Chong CE. et al, (2024), NPJ Antimicrob Resist, 2
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Epidemiology and excess mortality of antimicrobial resistance in bacteraemias among cancer patients: a cohort study using routinely collected health data from regional hospital trusts in Oxford and Oslo, 2008-2018
Preprint
Danielsen AS. et al, (2024)
