Exploring uncatalogued genetic variation in antimicrobial resistance gene families in Escherichia coli: an observational analysis.
Journal article
Lipworth S. et al, (2024), Lancet Microbe
Genomic epidemiology and longitudinal sampling of ward wastewater environments and patients reveals complexity of the transmission dynamics of bla KPC-carbapenemase-producing Enterobacterales in a hospital setting.
Journal article
Stoesser N. et al, (2024), JAC Antimicrob Resist, 6
Detecting changes in population trends in infection surveillance using community SARS-CoV-2 prevalence as an exemplar.
Journal article
Pritchard E. et al, (2024), Am J Epidemiol
Risk of SARS-CoV-2 reinfection during multiple Omicron variant waves in the UK general population.
Journal article
Wei J. et al, (2024), Nat Commun, 15
The plasmidome associated with Gram-negative bloodstream infections: a large-scale observational study using complete plasmid assemblies
Journal article
Lipworth S. et al, (2024), Nature Communications
Quantitative measurement of antibiotic resistance in Mycobacterium tuberculosis reveals genetic determinants of resistance and susceptibility in a target gene approach.
Journal article
CRyPTIC Consortium None., (2024), Nat Commun, 15
Persistence of SARS-CoV-2 antibodies over 18 months following infection: UK Biobank COVID-19 Serology Study.
Journal article
Bešević J. et al, (2023), J Epidemiol Community Health
Swab pooling enables rapid expansion of high-throughput capacity for SARS-CoV-2 community testing.
Journal article
Fagg J. et al, (2023), J Clin Virol, 167
Performance of antigen lateral flow devices in the UK during the alpha, delta, and omicron waves of the SARS-CoV-2 pandemic: a diagnostic and observational study.
Journal article
Eyre DW. et al, (2023), Lancet Infect Dis, 23, 922 - 932
Performance of self-collected saliva samples for SARS-CoV-2 mass testing in community settings
Journal article
Kay O. et al, (2023), Journal of Clinical Virology Plus, 3
Risk of SARS-CoV-2 reinfection during multiple Omicron variant waves in the UK general population
Preprint
Wei J. et al, (2023)
Protection against SARS-CoV-2 Omicron BA.4/5 variant following booster vaccination or breakthrough infection in the UK.
Journal article
Wei J. et al, (2023), Nat Commun, 14
Bedaquiline and clofazimine resistance in Mycobacterium tuberculosis: an in-vitro and in-silico data analysis.
Journal article
Sonnenkalb L. et al, (2023), Lancet Microbe, 4, e358 - e368
The quality of vital signs measurements and value preferences in electronic medical records varies by hospital, specialty, and patient demographics.
Journal article
Jackson N. et al, (2023), Sci Rep, 13
Improving the representativeness of UK’s national COVID-19 Infection Survey through spatio-temporal regression and post-stratification
Preprint
Pouwels KB. et al, (2023)
Antibiotic review kit for hospitals (ARK-Hospital): a stepped-wedge cluster-randomised controlled trial.
Journal article
Llewelyn MJ. et al, (2023), Lancet Infect Dis, 23, 207 - 221
Evaluation of Nanopore sequencing for Mycobacterium tuberculosis drug susceptibility testing and outbreak investigation: a genomic analysis.
Journal article
Hall MB. et al, (2023), Lancet Microbe, 4, e84 - e92
Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction.
Journal article
Sanderson ND. et al, (2023), Microb Genom, 9